#!/bin/bash
#
#SBATCH --job-name=glathida
#SBATCH --ntasks=1
#SBATCH --exclusive
#SBATCH --time=24:00:00
#SBATCH --mail-user=fabien.maussion@uibk.ac.at
#SBATCH --mail-type=ALL

# Abort whenever a single step fails. Without this, bash will just continue on errors.
set -e

# On every node, when slurm starts a job, it will make sure the directory
# /work/username exists and is writable by the jobs user.
# We create a sub-directory there for this job to store its runtime data at.
WORKDIR="/work/$SLURM_JOB_USER/$SLURM_JOB_ID/my_run"
mkdir -p "$WORKDIR"
echo "Workdir for this run: $WORKDIR"

# Export the WORKDIR as environment variable so our script can use it to find its working directory.
export WORKDIR

# Use the local data download cache
export OGGM_DOWNLOAD_CACHE=/home/data/download
export OGGM_DOWNLOAD_CACHE_RO=1
export OGGM_EXTRACT_DIR="/work/$SLURM_JOB_USER/$SLURM_JOB_ID/oggm_tmp"

module load oggm-binary-deps/4 python/3.8.5 
source ~/.py3/bin/activate
echo "Start papermill"
papermill glathida_to_rgi_glacier_attribution.ipynb -p gtd_dir GlaThiDa_2016

# Print a final message so you can actually see it being done in the output log.
echo "SLURM DONE"